- HeterogeneousPedestrianModel
- BiochemistryIncarnation
- ProtelisIncarnation
- SAPEREIncarnation
- RandomGeneratorExtension
- TimeExtension
- CognitiveModel
- ImpactModel
- ImpactModelKt
- AbstractCognitiveCharacteristic
- BeliefDanger
- BodyCognitiveCharacteristic
- CognitiveCharacteristic
- CognitiveSpec
- DesireEvacuate
- DesireWalkRandomly
- Fear
- IntentionEvacuate
- IntentionWalkRandomly
- MentalCognitiveCharacteristic
- FunctionsKt
- Age
- Characteristic
- Compliance
- ComplianceSpec
- Gender
- HelpAttitude
- HelpAttitudeSpec
- Speed
- SpeedSpec
- AbstractGroupSteeringAction
- AbstractLayerAction
- AbstractNavigationAction
- AbstractSteeringAction
- AbstractSteeringActionWithTarget
- CognitiveAgentArrive
- CognitiveAgentAvoidLayer
- CognitiveAgentCohesion
- CognitiveAgentCombineSteering
- CognitiveAgentExplore
- CognitiveAgentFlee
- CognitiveAgentFollowLayer
- CognitiveAgentFollowRoute
- CognitiveAgentFollowScalarField
- CognitiveAgentGoalOrientedExplore
- CognitiveAgentNavigationAction2D
- CognitiveAgentObstacleAvoidance
- CognitiveAgentPursue
- CognitiveAgentReachDestination
- CognitiveAgentReachKnownDestination
- CognitiveAgentSeek
- CognitiveAgentSeek2D
- CognitiveAgentSeparation
- CognitiveAgentWander
- AbstractEuclideanConfigurableMoveNode
- ConstantDistanceRandomWalk
- FollowAtDistance
- GenericRandomWalker
- HeadTowardRandomDirection
- HeadTowardTarget
- LevyWalk
- Spin
- RemoveNode
- BrownianMove
- AbstractAction
- MoveForwardAndTeleport
- AbstractConfigurableMoveNode
- MoveToTarget
- AbstractLocalAction
- AbstractMoveNode
- SetLocalMoleculeConcentration
- AbstractActionOnSingleMolecule
- ToggleMolecule
- ToggleMoleculeRandomly
- AbstractNeighborAction
- AbstractRandomizableAction
- CellMove
- AddJunctionInCell
- CellTensionPolarization
- ChangeBiomolConcentrationInCell
- RemoveJunctionInNeighbor
- ChemotacticPolarization
- ChangeBiomolConcentrationInEnv
- AddJunctionInNeighbor
- RandomPolarization
- ChangeBiomolConcentrationInNeighbor
- RemoveJunctionInCell
- SendToNeighbor
- RunProtelisProgram
- LsaCountNeighborsAction
- LsaAscendingGradientDist
- LsaAllNeighborsAction
- SAPEREWalker
- LsaStandardAction
- SAPEREMoveNodeAgent
- LsaAbstractAction
- LsaChangeArgument
- SAPEREMoveLSAToAgent
- LsaAscendingAgent
- SAPEREWalkerRiseGradient
- SAPERELocalAgent
- SAPEREChemotaxis
- LsaRandomNeighborAction
- SAPEREAgent
- SAPERENeighborAgent
- ReproduceGPSTrace
- GPSTraceWalker
- MoveOnMap
- TargetMapWalker
- MoveOnMapWithGPS
- RandomTargetInPolygonOnMap
- CameraInjectVisibleNodeClosestToDistance
- CameraSee
- IterableExtensionKt
- DestinationReaching
- DynamicPursuing
- Exploring
- GoalOrientedExploring
- KnownDestinationReaching
- Pursuing
- RouteFollowing
- DistanceWeighted
- Filtered
- Nearest
- SinglePrevalent
- ExponentialSmoothing
- TypeBased
- Weighted
- DistanceWeightedKt
- NearestKt
- WantToEscape
- ConcentrationChanged
- AbstractCondition
- MoleculeHasConcentration
- ContainsMolecule
- NoOtherReactionCanExecute
- AbstractNonPropensityContributingCondition
- NeighborhoodPresent
- BiomolPresentInCell
- GenericMoleculeUnderLevel
- BiomolPresentInEnv
- TensionPresent
- AbstractNeighborCondition
- EnvPresent
- GenericMoleculePresent
- JunctionPresentInCell
- BiomolPresentInNeighbor
- ComputationalRoundComplete
- LsaAbstractCondition
- LsaStandardCondition
- LsaNeighborhoodCondition
- Alone
- Family
- Friends
- GenericGroup
- GroupFactory
- AbstractCognitivePedestrian
- AbstractHeterogeneousPedestrian
- AbstractHomogeneousPedestrian
- AbstractOrientingPedestrian
- CognitiveOrientingPedestrian2D
- CognitivePedestrian2D
- HeterogeneousPedestrian2D
- HomogeneousOrientingPedestrian2D
- HomogeneousPedestrian2D
- CircleNode
- AbstractNode
- IntNode
- CircularDeformableCellImpl
- EnvironmentNodeImpl
- IntegerNode
- CellNodeImpl
- DoubleNode
- ProtelisNode
- LsaNode
- CognitiveOrientingPhysicalPedestrian2D
- CognitivePhysicalPedestrian2D
- HomogeneousOrientingPhysicalPedestrian2D
- HomogeneousPhysicalPedestrian2D
- BlendedSteering
- CognitiveBehavior
- NavigationPrioritisedSteering
- PrioritySteering
- SteeringBehavior
- Event
- AbstractReaction
- ChemicalReaction
- BiochemicalReactionBuilder
- BiochemicalReaction
- SAPEREReaction
- SAPEREGradient
- BlendedSteeringWithPhysics
- NavigationPrioritisedSteeringWithPhysics
- CognitivePedestrian
- CognitivePedestrian2D
- Group
- GroupSteeringAction
- GroupWithLeader
- HeterogeneousPedestrian
- NavigationAction
- NavigationStrategy
- OrientingAgent
- OrientingPedestrian
- Pedestrian
- Pedestrian2D
- PedestrianGroup
- PedestrianGroup2D
- SteeringAction
- SteeringActionWithTarget
- SteeringStrategy
- Obstacle2D
- Route
- EnvironmentNode
- CellNode
- CellWithCircularArea
- EnvironmentSupportingDeformableCells
- CircularDeformableCell
- ILsaNode
- ILsaMolecule
- ILsaCondition
- ILsaAction
- Layer
- TimeDistribution
- Incarnation
- Action
- LinkingRule
- Node
- Time
- Concentration
- Context
- Neighborhood
- Condition
- BenchmarkableEnvironment
- GeoPosition
- Molecule
- Environment
- Reaction
- Dependency
- EnvironmentWithObstacles
- EuclideanEnvironment
- Obstacle
- Position
- Position2D
- GPSTrace
- GPSPoint
- ObjectWithGPS
- TimedRoute
- MapEnvironment
- RoutingService
- RoutingServiceOptions
- PhysicalNode
- PhysicalPedestrian
- PhysicalPedestrian2D
- PhysicalSteeringStrategy
- VisibleNode
- LazyMutable
- RealDistributionUtil
- BidimensionalGaussian
- LazyMutableKt
- ArrayIndexedPriorityQueue
- Engine
- JGraphTDependencyGraph
- Euclidean2DPosition
- AbstractEuclideanPosition
- AbstractPosition
- LatLongPosition
- GPSPointImpl
- RectObstacle2D
- ConnectionBeam
- AbstractLocallyConsistentLinkingRule
- NoLinks
- AdaptiveRange
- ConditionalClosestN
- ClosestN
- ObstaclesBreakConnection
- ConnectWithinDistance
- ConnectToAccessPoint
- ConnectViaAccessPoint
- FullyConnected
- SelectiveAdaptiveRange
- CombinedLinkingRule
- OffsetGraphStreamLinkingRule
- LinkNodesWithinRoutingRange
- ConnectIfInLineOfSigthOnMap
- MuseumHall
- ImageEnvironment
- InfiniteHalls
- Continuous2DObstacles
- LimitedContinuos2D
- Continuous2DEnvironment
- ImageEnvironmentWithGraph
- Abstract2DEnvironment
- AbstractEnvironment
- BioRect2DEnvironmentNoOverlap
- BioRect2DEnvironment
- OSMEnvironment
- AbstractShapeFactory
- AwtShapeCompatible
- AdimensionalShape
- AbstractConvexPolygon
- AwtMutableConvexPolygon
- AwtShapeExtension
- Ellipse
- FieldOfView2D
- InfluenceSphere2D
- Segment2DImpl
- SlopeInterceptLine2D
- BaseNavigationGraph
- DirectedNavigationGraph
- UndirectedNavigationGraph
- GraphExtensionKt
- ExtendableConvexPolygonInEnvironment
- NaviGatorKt
- RandomTarget
- ChangeTargetOnCollision
- AbstractStrategyWithGPS
- Environment2DWithObstacles
- EnvironmentWithGraph
- Euclidean2DEnvironment
- Euclidean2DEnvironmentWithGraph
- Euclidean2DEnvironmentWithObstacles
- EuclideanPhysics2DEnvironmentWithGraph
- EuclideanPhysics2DEnvironmentWithObstacles
- Physics2DEnvironment
- PhysicsEnvironment
- PhysicsEnvironmentWithGraph
- ConvexGeometricShape
- GeometricShapeFactory
- InfluenceSphere
- GeometricShape
- GeometricTransformation
- Vector
- Vector2D
- ConvexPolygon
- Euclidean2DShapeFactory
- Euclidean2DTransformation
- Intersection2D
- Line2D
- MutableConvexPolygon
- Segment2D
- Euclidean2DPassage
- NavigationGraph
- ExtendableConvexPolygon
- NodeWithShape
- NodeViewPort
- FXStepMonitor
- PlayPauseMonitor
- FXTimeMonitor
- NumericLabelMonitor
- ResourceLoader
- SVGImageUtils
- FXResourceLoader
- DataFormatFactory
- AbstractEffect
- EffectBuilderFX
- EffectStack
- EffectFX
- DrawDot
- DrawColoredDot
- EffectGroup
- DrawLinks
- Effect
- EffectBuilder
- EffectSerializationFactory
- DrawBidimensionalGaussianLayersIsolines
- DrawLayersIsolines
- AbstractDrawLayers
- DrawBidimensionalGaussianLayersGradient
- DrawLayersValues
- DrawCognitiveMap
- JEffectsTab
- DrawPedestrianPath
- DrawNavigationGraph
- DrawSmartcam
- DrawOnce
- DrawLayers
- FunctionDrawer
- JEffectRepresentation
- DrawLayersGradient
- DrawShape
- EffectFactory
- BidimensionalGaussianLayersMapper
- LayerToFunctionMapper
- ColorSerializationAdapter
- EffectSerializer
- EffectGroupAdapter
- CommandQueueBuilder
- AlchemistSwingUI
- SimControlCommand
- ColorChannel
- StatusBar
- ReactivityPanel
- SingleRunGUI
- FileMenu
- SimControlPanel
- SimControlButton
- AbstractMenu
- NumericTextField
- SingleRunApp
- EffectGroupCell
- EffectCell
- AbstractEffectCell
- SerializableStringProperty
- RangedIntegerProperty
- PropertyFactory
- SerializableEnumProperty
- SerializableBooleanProperty
- PropertyTypeAdapter
- RangedDoubleProperty
- EffectPropertiesController
- ControlTypePopoverController
- EffectsGroupBarController
- EffectBarController
- ButtonsBarController
- FXOutputMonitor
- DrawCommand
- OutputMonitor
- Graphical2DOutputMonitor
- GraphicalOutputMonitor
- SupportedIncarnations
- BugReporting
- ClassPathScanner
- ApplicationThreadExtensionsKt
- AnyExtension
- DoubleExtensionKt
- HashesKt
- RandomGeneratorExtensionKt
- RangeExtensionKt
- CustomLeafletMapView
- Keybind
- KeybindModel
- KeybindController
- ListKeybindsView
- EditKeybindView
- Keybinder
- CanvasExtensionsKt
- PointExtensionsKt
- RectangleExtensionsKt
- AnalogPanHelper
- BaseInteractionManager
- DigitalPanManager
- Direction2D
- InteractionManager
- SelectionHelper
- AbstractEventDispatcher
- ActionListener
- EventDispatcher
- PersistentEventDispatcher
- TriggerAction
- ActionOnKey
- KeyboardActionListener
- KeyboardEventDispatcher
- KeyboardTriggerAction
- SimpleKeyboardEventDispatcher
- ActionOnMouse
- DynamicMouseEventDispatcher
- MouseActionListener
- MouseButtonTriggerAction
- MouseEventDispatcher
- MouseMovement
- MouseTriggerAction
- NodeBoundMouseEventDispatcher
- SimpleMouseEventDispatcher
- AbstractFXDisplay
- FX2DDisplay
- LeafletMapDisplay
- TimeStepMonitor
- NodeTracker
- MapDisplay
- Generic2DDisplay
- MoleculeInjectorGUI
- ActionFromKey
- KeybindsSerializer
- Keybinds
- SingleRunFXUI
- DistributedExecution
- IgniteServerLauncher
- SingleRunSwingUI
- LeafletMapWormhole
- WormholeFX
- LeafletMapWormholeKt
- SimulationSetImpl
- Complexity
- RemoteSimulationImpl
- RemoteResult
- SimulationSet
- ComplexityImpl
- RemoteResultImpl
- RemoteSimulation
- WorkingDirectory
- GeneralSimulationConfig
- RemoteGeneralSimulationConfig
- SimulationConfig
- SimulationConfigImpl
- LightInfoGeneralSimulationConfig
- LocalGeneralSimulationConfig
- Cluster
- WorkerSet
- WorkerSetImpl
- ClusterImpl
- RemoteSimulationException
- RoutingStrategy
- SpeedSelectionStrategy
- TargetSelectionStrategy
- UniformLayer
- StepLayer
- BidimensionalGaussianLayer
- BiomolGradientLayer
- ConstantSpeed
- InteractWithOthers
- ConstantSpace
- GloballyConstantSpeed
- TraceDependantSpeed
- StraightLineTraceDependantSpeed
- RoutingTraceDependantSpeed
- FollowTarget
- FollowTargetOnMap
- FollowTrace
- DoubleTime
- PolygonalChain
- GPSTraceImpl
- GraphHopperRoute
- AnyRealDistribution
- WeibullTime
- WeibullDistributedWeibullTime
- DiracComb
- Trigger
- ExponentialTime
- AbstractDistribution
- RandomDiracComb
- MoleculeControlledTimeDistribution
- SAPEREExponentialTime
- SAPERETimeDistribution
- SimpleMolecule
- Junction
- Biomolecule
- LsaMolecule
- Neighborhoods
- SimpleNeighborhood
- AfterTime
- StableForSteps
- DiracDeltaDistribution
- BiochemistryParseException
- UncomparableDistancesException
- AlchemistNetworkManager
- AlchemistExecutionContext
- Local
- LsaConcentration
- Scheduler
- DependencyGraph
- Status
- Simulation
- Rectangle
- Abstract2DShape
- Circle
- Shape
- FilteringPolicy
- StatUtil
- Exporter
- Extractor
- CommonFilters
- Variable
- ArbitraryVariable
- LinearVariable
- GeometricVariable
- DependentVariable
- Flag
- PrintableVariable
- NumericConstant
- Constant
- JSR223Variable
- IllegalAlchemistYAMLException
- Loader
- AlchemistModelProvider
- EnvironmentAndExports
- GraphStreamSupport
- InitializedEnvironment
- LoadAlchemist
- Rectangle
- Deployment
- Circle
- GeometricGradientRectangle
- Point
- AbstractCloseTo
- AbstractRandomDeployment
- CircularArc
- CloseToAlreadyDeployed
- GraphStreamDeployment
- Grid
- Polygon
- SpecificPositions
- FromGPSTrace
- CloseToGPSTrace
- AbstractExporter
- CSVExporter
- GlobalExporter
- MongoDBExporter
- MongoService
- ExecutionTime
- MeanSquaredError
- MoleculeReader
- NumberOfNodes
- Time
- CountDistinct
- OrderedParametersConstructor
- NamedParametersConstructor
- JVMConstructor
- YamlProvider
- MapUtils
- OnStreets
- IgnoreStreets
- AlignToSimulationTime
- AbstractGPSTimeAlignment
- NoAlignment
- AlignToTime
- AlignToFirstTrace
- GPSTimeAlignment
- GPSFileLoader
- GPXLoader
- TraceLoader
- GraphHopperOptions
- GraphHopperRoutingService
- Sum
- Exp
- ExpTokenManager
- ExpConstants
- Token
- ParseException
- SimpleCharStream
- TokenMgrError
- IExpression
- ITree
- ITreeNode
- ListComparatorTreeNode
- UIDNode
- VarTreeNode
- Type
- ComparatorTreeNode
- AST
- Operator
- ListComparator
- OperatorTreeNode
- ExpressionFactory
- ConstTreeNode
- ATreeNode
- Expression
- NumTreeNode
- ListTreeNode
- VisibleNodeImpl
- LocalizedResourceBundle
- JOutputMonitorRepresentation
- ClassItem
- JTape
- JTapeTab
- JTapeSection
- JTapeMainFeature
- JTapeFeatureStack
- JTapeGroup
- IsolinesFinder
- ConrecIsolinesFinder
- ConcreteIsolinesFactory
- Segment2D
- Isoline
- IsolinesFactory
- AFlowLayout
- VerticalFlowLayout
- HorizontalFlowLayout
- MapWormhole
- AngleManagerImpl
- WormholeSwing
- PointAdapter
- AbstractSlideInputManager
- ExponentialZoomManager
- AbstractWormhole2D
- PointerSpeedImpl
- LinearZoomManager
- DoubleDimension
- ComponentViewPort
- InitMapsForge
- AlchemistTesting
- EuclideanSimulationKt
- Wormhole2D
- SlideInputManager
- AngleManager
- ZoomManager
- ViewPort
- PointerSpeed