BiochemicalReactionBuilder

All Implemented Interfaces:


public class BiochemicalReactionBuilder<P extends Position<P>, Vector<P>>

This class implements a builder for chemical reactions.

Nested Class Summary

Nested Classes
Modifier and Type	Class	Description

Field Summary

Fields
Modifier and Type	Field	Description

Constructor Summary

Constructors
Constructor	Description
`BiochemicalReactionBuilder(BiochemistryIncarnation incarnation, Node<Double> currentNode, Environment<Double, P> environment)`	Construct a builder for biochemical reactions.

Enum Constant Summary

Enum Constants
Enum Constant	Description

Method Summary

Modifier and Type	Method	Description
`Reaction<Double>`	`build()`	Builds the chemical reaction.
`BiochemicalReactionBuilder<P>`	`program(String program)`	Set the reaction to the passed program string.
`BiochemicalReactionBuilder<P>`	`randomGenerator(RandomGenerator rg)`	set the random generator to the passed object.
`BiochemicalReactionBuilder<P>`	`timeDistribution(TimeDistribution<Double> td)`	Set the time distribution to the passed object.

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - BiochemicalReactionBuilder
```
BiochemicalReactionBuilder(BiochemistryIncarnation incarnation, Node<Double> currentNode, Environment<Double, P> environment)
```
    Construct a builder for biochemical reactions.
    
    Parameters:
    
    incarnation - the current incarnation
    
    currentNode - the node where the reaction is placed.
    
    environment - the environment.
- Method Detail
  - build
```
 Reaction<Double> build()
```
    Builds the chemical reaction.
    
    Returns:
    
    a chemical reaction based on the given program
  - program
```
 BiochemicalReactionBuilder<P> program(String program)
```
    Set the reaction to the passed program string.
    
    Parameters:
    
    program - the string version of this reaction
    
    Returns:
    
    .
  - randomGenerator
```
 BiochemicalReactionBuilder<P> randomGenerator(RandomGenerator rg)
```
    set the random generator to the passed object.
    
    Parameters:
    
    rg - the random generator.
    
    Returns:
    
    .
  - timeDistribution
```
 BiochemicalReactionBuilder<P> timeDistribution(TimeDistribution<Double> td)
```
    Set the time distribution to the passed object.
    
    Parameters:
    
    td - the time distribution
    
    Returns:
    
    .