All Implemented Interfaces:: it.unibo.alchemist.model.interfaces.Incarnation


public final class BiochemistryIncarnation<P extends Position<P>, Vector<P>>
 implements Incarnation<Double, P>

Nested Class Summary

Nested Classes
Modifier and Type	Class	Description

Field Summary

Fields
Modifier and Type	Field	Description

Constructor Summary

Constructors
Constructor	Description

Enum Constant Summary

Enum Constants
Enum Constant	Description

Method Summary

Modifier and Type	Method	Description
`double`	`getProperty(Node<Double> node, Molecule molecule, String property)`
`Biomolecule`	`createMolecule(String s)`
`CellNode<P>`	`createNode(RandomGenerator randomGenerator, Environment<Double, P> environment, String parameter)`
`TimeDistribution<Double>`	`createTimeDistribution(RandomGenerator randomGenerator, Environment<Double, P> environment, Node<Double> node, String parameter)`
`Reaction<Double>`	`createReaction(RandomGenerator randomGenerator, Environment<Double, P> environment, Node<Double> node, TimeDistribution<Double> timeDistribution, String parameter)`
`Condition<Double>`	`createCondition(RandomGenerator randomGenerator, Environment<Double, P> environment, Node<Double> node, TimeDistribution<Double> time, Reaction<Double> reaction, String additionalParameters)`
`Action<Double>`	`createAction(RandomGenerator randomGenerator, Environment<Double, P> environment, Node<Double> node, TimeDistribution<Double> time, Reaction<Double> reaction, String additionalParameters)`
`Double`	`createConcentration(String s)`
`String`	`toString()`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Method Detail

getProperty

 double getProperty(Node<Double> node, Molecule molecule, String property)

createMolecule
```
 Biomolecule createMolecule(String s)
```

createNode

 CellNode<P> createNode(RandomGenerator randomGenerator, Environment<Double, P> environment, String parameter)

createTimeDistribution

 TimeDistribution<Double> createTimeDistribution(RandomGenerator randomGenerator, Environment<Double, P> environment, Node<Double> node, String parameter)

createReaction

 Reaction<Double> createReaction(RandomGenerator randomGenerator, Environment<Double, P> environment, Node<Double> node, TimeDistribution<Double> timeDistribution, String parameter)

createCondition

 Condition<Double> createCondition(RandomGenerator randomGenerator, Environment<Double, P> environment, Node<Double> node, TimeDistribution<Double> time, Reaction<Double> reaction, String additionalParameters)

createAction

 Action<Double> createAction(RandomGenerator randomGenerator, Environment<Double, P> environment, Node<Double> node, TimeDistribution<Double> time, Reaction<Double> reaction, String additionalParameters)

createConcentration
```
 Double createConcentration(String s)
```

toString
```
 String toString()
```

Class BiochemistryIncarnation

Nested Class Summary

Field Summary

Constructor Summary

Enum Constant Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

Method Detail

getProperty

createMolecule

createNode

createTimeDistribution

createReaction

createCondition

createAction

createConcentration

toString