Constructor Detail

Method Detail

• getNodes

   final ListSet<Node<T>> getNodes()

• getSimulation

   final Simulation<T, P> getSimulation()

• setSimulation

   final void setSimulation(Simulation<T, P> s)

• addLayer

   final void addLayer(Molecule m, Layer<T, P> l)

• addNode

   final void addNode(Node<T> node, P p)

• addTerminator

   final void addTerminator(Predicate<Environment<T, P>> terminator)

• forEach

   final void forEach(Consumer<out Object> action)

• getDistanceBetweenNodes

   final double getDistanceBetweenNodes(Node<T> n1, Node<T> n2)

• getLayer

   final Optional<Layer<T, P>> getLayer(Molecule m)

• getLinkingRule

   final LinkingRule<T, P> getLinkingRule()

• setLinkingRule

   final void setLinkingRule(LinkingRule<T, P> r)

• getNeighborhood

   final Neighborhood<T> getNeighborhood(@Nonnull() Node<T> center)

• getNodeByID

   final Node<T> getNodeByID(int id)

• getNodeCount

   final int getNodeCount()

• getNodesWithinRange

   final ListSet<Node<T>> getNodesWithinRange(Node<T> center, double range)

• getNodesWithinRange

   final ListSet<Node<T>> getNodesWithinRange(P center, double range)

• getPosition

  @Nonnull() final P getPosition(Node<T> node)

  This method should not get overridden in general. However, if your

• getSizeInDistanceUnits

   Array<double> getSizeInDistanceUnits()

  Override this method if units measuring distance do not match with units used for coordinates. For instance, if your space is non-Euclidean, or if you are using polar coordinates. A notable example is using geographical latitude-longitude as y-x coordinates and meters as distance measure.

• isTerminated

   final boolean isTerminated()

• iterator

  @Nonnull() final Iterator<Node<T>> iterator()

• removeNode

   final void removeNode(@Nonnull() Node<T> node)

• spliterator

   final Spliterator<Node<T>> spliterator()

• toString

   String toString()

  Not used internally. Override as you please.