alchemist-implementationbase/it.unibo.alchemist.model.reactions/ChemicalNodeReaction

ChemicalNodeReaction

open class ChemicalNodeReaction<T>(node: Node<T>, timeDistribution: TimeDistribution<T>) : AbstractMarkovianNodeReaction<T> (source)

Base for memoryless chemical reactions.

The generic implementation accepts no conditions: concrete chemical families must define their accepted semantic condition types and compute their own rate from typed model state. Construction rejects non-memoryless distributions.

Type Parameters

concentration type

Constructors

ChemicalNodeReaction

constructor(node: Node<T>, timeDistribution: TimeDistribution<T>)

Properties

actions

open override var actions: List<Action<T>>

canExecute

open override val canExecute: Observable<Boolean>

conditions

open override var conditions: List<Condition<T>>

finitePositiveMeanDelayOrError

open val finitePositiveMeanDelayOrError: Double

host

override val host: Node<T>

meanDelay

open override val meanDelay: Double

nextOccurrence

override val nextOccurrence: Observable<Time>

rate

override val rate: Double

The current rate of the exponentially distributed delays, namely the propensity of this reaction. By default, it is the rate of its ExponentialTime.

timeDistribution

override val timeDistribution: TimeDistribution<T>

Functions

cloneOnNewNode

open override fun cloneOnNewNode(node: Node<T>): ChemicalNodeReaction<T>

compareTo

operator override fun compareTo(other: Reaction<T>): Int

dispose

open override fun dispose()

execute

open override fun execute()

Prepares valid conditions, applies the model mutation, and advances surviving distributed reactions.

initializationComplete

override fun initializationComplete(atTime: Time, environment: Environment<T, *>)

Initializes reactive inputs after the model has been fully assembled.

toString

open override fun toString(): String

updateSchedulingAfterFiring

override fun updateSchedulingAfterFiring(currentTime: Time)

Refreshes reaction state after firing, then applies firing scheduling policy.

updateSchedulingAfterInvalidation

override fun updateSchedulingAfterInvalidation(currentTime: Time)