alchemist/it.unibo.alchemist.model.biochemistry.molecules/Junction

Junction

class Junction : SimpleMolecule

Represents a junction between two cells.

Constructors

constructor(name: String, moleculesInCurrentNode: Map<Biomolecule, Double>, moleculesInNeighborNode: Map<Biomolecule, Double>)

Builds a junction.

constructor(toClone: Junction)

Builds a junction from another junction.

Properties

moleculesInCurrentNode

val moleculesInCurrentNode: Map<Biomolecule, Double>

moleculesInNeighborNode

val moleculesInNeighborNode: Map<Biomolecule, Double>

Functions

open fun equals(obj: Any): Boolean

abstract fun getName(): String

The name of this Molecule.

fun getName(): String

The name of this Molecule.

open fun hashCode(): Int

context(incarnation: Incarnation<T, *>, node: Node<T>)
operator fun <T> Molecule.invoke(concentration: T = incarnation.createConcentration())

Assigns the given concentration to this Molecule on the current Node.

open fun reverse(): Junction

Return the reversed junction of the current junction.

toGraphQLMoleculeSurrogate

fun Molecule.toGraphQLMoleculeSurrogate(): MoleculeSurrogate

Converts a Molecule to a MoleculeSurrogate.

toMoleculeSurrogate

fun Molecule.toMoleculeSurrogate(): MoleculeSurrogate

A function that maps a it.unibo.alchemist.model.Molecule to its surrogate class MoleculeSurrogate.

open fun toString(): String

context(incarnation: Incarnation<T, *>, _: Node<T>)
operator fun <T> Molecule.unaryMinus()

Assigns a default concentration for this Molecule to the current Node.