alchemist-incarnation-biochemistry/it.unibo.alchemist.model.biochemistry.conditions/GenericMoleculePresent

GenericMoleculePresent

open class GenericMoleculePresent<T : Number?> : AbstractCondition<T> (source)

This class implements a condition which checks if a molecule is present or not.

Parameters

<T>

the concentration type

Inheritors

GenericMoleculeUnderLevel

BiomolPresentInEnv

BiomolPresentInCell

Constructors

GenericMoleculePresent

constructor(n: Node<T>, mol: Molecule, quantity: T)

Builds a new condition, which checks if the molecule exists or not inside the node n.

Properties

val molecule: Molecule

val node: Node<T>

Functions

open fun cloneCondition(node: Node<T>, reaction: Reaction<T>): GenericMoleculePresent<T>

open fun getContext(): Context

getInboundDependencies

fun getInboundDependencies(): ListSet<out Dependency>

getPropensityContribution

open fun getPropensityContribution(): Double

Propensity influence is computed through the binomial coefficient.

open fun getQuantity(): T

Allows to access the threshold.

open fun isValid(): Boolean

open fun reactionReady()

open fun toString(): String