alchemist-incarnation-biochemistry/it.unibo.alchemist.model.biochemistry.conditions/JunctionPresentInCell

JunctionPresentInCell

class JunctionPresentInCell : AbstractNeighborCondition<T> (source)

Constructors

JunctionPresentInCell

constructor(environment: Environment<Double, out Any>, node: Node<Double>, junction: Junction)

Properties

val node: Node<T>

Functions

open fun cloneCondition(node: Node<Double>, r: Reaction<Double>): JunctionPresentInCell

open fun cloneCondition(node: Node<T>, reaction: Reaction<T>): Condition<T>

abstract fun getContext(): Context

fun getContext(): Context

getInboundDependencies

fun getInboundDependencies(): ListSet<out Dependency>

getPropensityContribution

abstract fun getPropensityContribution(): Double

open fun getPropensityContribution(): Double

Override if desired behavior differs.

getValidNeighbors

fun getValidNeighbors(): Map<Node<T>, Double>

Searches in the given neighborhood which nodes satisfy the condition, and returns a list of valid neighbors.

open fun isValid(): Boolean

open fun reactionReady()

open fun toString(): String