BiochemistryIncarnation

Factory for the biochemistry incarnation entities.

Constructors

constructor()

open fun createAction(randomGenerator: RandomGenerator, environment: Environment<Double, Euclidean2DPosition>, node: Node<Double>, time: TimeDistribution<Double>, actionable: Actionable<Double>, @Nullable additionalParameters: Any): Action<Double>

open fun createConcentration(@Nullable descriptor: Any): Double

open fun createCondition(randomGenerator: RandomGenerator, environment: Environment<Double, Euclidean2DPosition>, node: Node<Double>, time: TimeDistribution<Double>, actionable: Actionable<Double>, @Nullable additionalParameters: Any): Condition<Double>

open fun createNode(randomGenerator: RandomGenerator, environment: Environment<Double, Euclidean2DPosition>, @Nullable parameter: Any): Node<Double>

open fun createReaction(randomGenerator: RandomGenerator, environment: Environment<Double, Euclidean2DPosition>, node: Node<Double>, timeDistribution: TimeDistribution<Double>, @Nullable parameter: Any): Reaction<Double>

open fun createTimeDistribution(randomGenerator: RandomGenerator, environment: Environment<Double, Euclidean2DPosition>, node: Node<Double>, @Nullable parameter: Any): TimeDistribution<Double>

open fun getProperty(node: Node<Double>, molecule: Molecule, property: String): Double