39.0.1

alchemist/it.unibo.alchemist.model.biochemistry.conditions/GenericMoleculeUnderLevel

GenericMoleculeUnderLevel

class GenericMoleculeUnderLevel<T : Number?> : GenericMoleculePresent<T>

Parameters

<T>

the concentration type

Constructors

GenericMoleculeUnderLevel

constructor(n: Node<T>, mol: Molecule, quantity: T)

Properties

val molecule: Molecule

val node: Node<T>

Functions

abstract fun cloneCondition(node: Node<T>, reaction: Reaction<T>): Condition<T>

open fun cloneCondition(newNode: Node<T>, newReaction: Reaction<T>): Condition<T>

This method allows cloning this action on a new node.

open fun cloneCondition(newNode: Node<T>, newReaction: Reaction<T>): GenericMoleculeUnderLevel<T>

How to override: create a new action of your concrete subtype.

open fun getContext(): Context

getInboundDependencies

fun getInboundDependencies(): ListSet<? extends Dependency>

How to override: if you intend your condition to be potentially changed by any change in the context, return null.

getPropensityContribution

open fun getPropensityContribution(): Double

open fun getQuantity(): T

Allows accessing the threshold.

open fun isValid(): Boolean

open fun reactionReady()

This method is called by the Simulation once the Reaction whose this Condition belongs to is the next one to be executed, and all its conditions passed (namely, the next operation will be the reaction execution).

open fun toString(): String