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B

backup(int) - function in it.unibo.alchemist.model.sapere.dsl.parser.SimpleCharStream

Backup a number of characters.

BaseNavigationGraph - class in it.unibo.alchemist.model.geometry.navigationgraph

An implementation of NavigationGraph, deriving from AbstractBaseGraph.

BatchedScheduler - class in it.unibo.alchemist.core

Extension to Scheduler to allow for batched retrieval from the queue.

BatchEngine - class in it.unibo.alchemist.core

This class implements a simulation.

BeginToken() - function in it.unibo.alchemist.model.sapere.dsl.parser.SimpleCharStream

Start.

BeliefDanger - class in it.unibo.alchemist.model.cognitive.impact.cognitive

The perception of the situation danger.

BenchmarkableEnvironment - class in it.unibo.alchemist.model

An environment which provides a mean to get infos about its performances.

BidimensionalGaussian - class in it.unibo.alchemist.util.math

A 2D gaussian function.

BidimensionalGaussianLayer - class in it.unibo.alchemist.model.layers

A Layer based on a 2D gaussian function and an optional baseline value.

bindDataExtractors(java.util.List) - function in it.unibo.alchemist.boundary.Exporter

Assign the list of dataExtractors to the selected Exporter.

bindDataExtractors(java.util.List) - function in it.unibo.alchemist.boundary.exporters.AbstractExporter

Assign the list of dataExtractors to the selected Exporter.

bindDataExtractors(java.util.List) - function in it.unibo.alchemist.boundary.exporters.AbstractExporter

Assign the list of dataExtractors to the selected Exporter.

bindDataExtractors(java.util.List) - function in it.unibo.alchemist.boundary.exporters.AbstractExporter

 

bindVariables(java.util.Map) - function in it.unibo.alchemist.boundary.Exporter

Assign the map of variables to the selected Exporter.

bindVariables(java.util.Map) - function in it.unibo.alchemist.boundary.exporters.AbstractExporter

Assign the map of variables to the selected Exporter.

bindVariables(java.util.Map) - function in it.unibo.alchemist.boundary.exporters.AbstractExporter

Assign the map of variables to the selected Exporter.

bindVariables(java.util.Map) - function in it.unibo.alchemist.boundary.exporters.AbstractExporter

 

biochemicalReaction() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

biochemicalReaction() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.ReactionContext

 

BiochemicalReaction - class in it.unibo.alchemist.model.biochemistry.reactions

A biochemical Reaction.

BiochemicalReactionBuilder - class in it.unibo.alchemist.model.biochemistry.reactions

This class implements a builder for chemical reactions.

biochemicalReactionLeft() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

biochemicalReactionLeft() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionContext

 

biochemicalReactionLeftContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

biochemicalReactionLeftContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionLeftContext

 

biochemicalReactionLeftContext(int) - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionLeftContext

 

biochemicalReactionLeftContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.CreateJunctionLeftContext

 

biochemicalReactionLeftContext(int) - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.CreateJunctionLeftContext

 

biochemicalReactionLeftContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.JunctionReactionLeftContext

 

biochemicalReactionLeftContext(int) - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.JunctionReactionLeftContext

 

biochemicalReactionLeftInCellContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

biochemicalReactionLeftInCellContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionLeftContextContext

 

biochemicalReactionLeftInCellContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.CreateJunctionLeftContext

 

biochemicalReactionLeftInEnvContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

biochemicalReactionLeftInEnvContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionLeftContextContext

 

biochemicalReactionLeftInNeighborContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

biochemicalReactionLeftInNeighborContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionLeftContextContext

 

biochemicalReactionLeftInNeighborContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.CreateJunctionLeftContext

 

biochemicalReactionRight() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

biochemicalReactionRight() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionContext

 

biochemicalReactionRightContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

biochemicalReactionRightContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionRightContext

 

biochemicalReactionRightContext(int) - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionRightContext

 

biochemicalReactionRightContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.CreateJunctionRightContext

 

biochemicalReactionRightContext(int) - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.CreateJunctionRightContext

 

biochemicalReactionRightContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.JunctionReactionRightContext

 

biochemicalReactionRightContext(int) - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.JunctionReactionRightContext

 

biochemicalReactionRightElem() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

biochemicalReactionRightElem() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionRightInCellContextContext

 

biochemicalReactionRightElem(int) - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionRightInCellContextContext

 

biochemicalReactionRightElem() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionRightInEnvContextContext

 

biochemicalReactionRightElem(int) - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionRightInEnvContextContext

 

biochemicalReactionRightElem() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionRightInNeighborContextContext

 

biochemicalReactionRightElem(int) - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionRightInNeighborContextContext

 

biochemicalReactionRightInCellContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

biochemicalReactionRightInCellContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionRightContextContext

 

biochemicalReactionRightInEnvContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

biochemicalReactionRightInEnvContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionRightContextContext

 

biochemicalReactionRightInNeighborContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

biochemicalReactionRightInNeighborContext() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionRightContextContext

 

BiochemistrydslBaseListener - class in it.unibo.alchemist.model.biochemistry.dsl

This class provides an empty implementation of BiochemistrydslListener, which can be extended to create a listener which only needs to handle a subset of the available methods.

BiochemistrydslBaseVisitor - class in it.unibo.alchemist.model.biochemistry.dsl

This class provides an empty implementation of BiochemistrydslVisitor, which can be extended to create a visitor which only needs to handle a subset of the available methods.

BiochemistrydslLexer - class in it.unibo.alchemist.model.biochemistry.dsl

 

BiochemistrydslListener - class in it.unibo.alchemist.model.biochemistry.dsl

This interface defines a complete listener for a parse tree produced by BiochemistrydslParser.

BiochemistrydslParser - class in it.unibo.alchemist.model.biochemistry.dsl

 

BiochemistrydslParser.ArgContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.ArgListContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.BiochemicalReactionContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.BiochemicalReactionLeftContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.BiochemicalReactionLeftContextContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.BiochemicalReactionLeftInCellContextContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.BiochemicalReactionLeftInEnvContextContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.BiochemicalReactionLeftInNeighborContextContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.BiochemicalReactionRightContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.BiochemicalReactionRightContextContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.BiochemicalReactionRightElemContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.BiochemicalReactionRightInCellContextContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.BiochemicalReactionRightInEnvContextContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.BiochemicalReactionRightInNeighborContextContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.BiomoleculeContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.ConcentrationContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.CreateJunctionContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.CreateJunctionJunctionContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.CreateJunctionLeftContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.CreateJunctionRightContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.CustomConditionContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.CustomConditionsContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.CustomReactionTypeContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.DecimalContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.JavaClassContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.JavaConstructorContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.JunctionContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.JunctionLeftContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.JunctionReactionContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.JunctionReactionJunctionConditionContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.JunctionReactionJunctionContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.JunctionReactionLeftContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.JunctionReactionRightContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.JunctionRightContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslParser.ReactionContext - class in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

BiochemistrydslVisitor - class in it.unibo.alchemist.model.biochemistry.dsl

This interface defines a complete generic visitor for a parse tree produced by BiochemistrydslParser.

BiochemistryIncarnation - class in it.unibo.alchemist.model.biochemistry

Factory for the biochemistry incarnation entities.

BiochemistryParseException - class in it.unibo.alchemist.model.biochemistry

Represents an exception thrown when parse errors are encountered.

biomolecule() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser

 

biomolecule() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionLeftInCellContextContext

 

biomolecule(int) - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionLeftInCellContextContext

 

biomolecule() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionLeftInEnvContextContext

 

biomolecule(int) - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionLeftInEnvContextContext

 

biomolecule() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionLeftInNeighborContextContext

 

biomolecule(int) - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionLeftInNeighborContextContext

 

biomolecule() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.BiochemicalReactionRightElemContext

 

biomolecule() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.JunctionLeftContext

 

biomolecule(int) - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.JunctionLeftContext

 

biomolecule() - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.JunctionRightContext

 

biomolecule(int) - function in it.unibo.alchemist.model.biochemistry.dsl.BiochemistrydslParser.JunctionRightContext

 

Biomolecule - class in it.unibo.alchemist.model.biochemistry.molecules

 

BiomolGradientLayer - class in it.unibo.alchemist.model.biochemistry.layers

A Layer representing a linear distribution in space of a molecule.

BiomolPresentInCell - class in it.unibo.alchemist.model.biochemistry.conditions

 

BiomolPresentInEnv - class in it.unibo.alchemist.model.biochemistry.conditions

 

BiomolPresentInNeighbor - class in it.unibo.alchemist.model.biochemistry.conditions

 

BioRect2DEnvironment - class in it.unibo.alchemist.model.biochemistry.environments

 

BioRect2DEnvironmentNoOverlap - class in it.unibo.alchemist.model.biochemistry.environments

Implements a limited environment supporting cells with a defined shape, avoiding any overlapping among them.

BlendedSteering - class in it.unibo.alchemist.model.cognitive.reactions

Steering behavior using DistanceWeighted steering strategy (= steering actions are summed with different weights depending on the distance to their target).

BodyCognitiveCharacteristic - class in it.unibo.alchemist.model.cognitive.impact.cognitive

A cognitive characteristic which has a body response.

boundingBox(double) - function in it.unibo.alchemist.model.GPSPoint

 

boundingBox(double) - function in it.unibo.alchemist.model.GeoPosition

Given a range, produces N coordinates, representing the N opposite vertices of the hypercube having the current coordinate as center and circumscribing the N-sphere defined by the range.

boundingBox(java.lang.Double) - function in it.unibo.alchemist.model.Position

Given a range, produces N coordinates, representing the N opposite vertices of the hypercube having the current coordinate as center and circumscribing the N-sphere defined by the range.

boundingBox(java.lang.Double) - function in it.unibo.alchemist.model.Position2D

Given a range, produces N coordinates, representing the N opposite vertices of the hypercube having the current coordinate as center and circumscribing the N-sphere defined by the range.

boundingBox(double) - function in it.unibo.alchemist.model.maps.positions.GPSPointImpl

 

boundingBox(double) - function in it.unibo.alchemist.model.maps.positions.LatLongPosition

 

boundingBox(double) - function in it.unibo.alchemist.model.positions.AbstractPosition

 

boundingBox(double) - function in it.unibo.alchemist.model.positions.AbstractPosition

 

boundingBox(java.lang.Double) - function in it.unibo.alchemist.model.positions.AbstractPosition

 

BrownianMove - class in it.unibo.alchemist.model.actions

Moves the node randomly.

BugReporting - class in it.unibo.alchemist.util

Entrypoint for printing meaningful debug information in case of failed internal consistency checks.

build() - function in it.unibo.alchemist.model.biochemistry.reactions.BiochemicalReactionBuilder

Builds the chemical reaction.

buildAny(java.lang.Class,org.danilopianini.jirf.Factory) - function in it.unibo.alchemist.boundary.loader.util.JVMConstructor

Provided a JIRF factory, builds an instance of the requested type T or fails gracefully, returning a Result<T>.

buildAny(java.lang.Class,org.danilopianini.jirf.Factory) - function in it.unibo.alchemist.boundary.loader.util.JVMConstructor

Provided a JIRF factory, builds an instance of the requested type T or fails gracefully, returning a Result<T>.

buildAny(org.danilopianini.jirf.Factory) - function in it.unibo.alchemist.boundary.loader.util.JVMConstructor

Provided a JIRF factory, builds an instance of the requested type T or fails gracefully, returning a Result<T>.

buildAny(org.danilopianini.jirf.Factory) - function in it.unibo.alchemist.boundary.loader.util.JVMConstructor

Provided a JIRF factory, builds an instance of the requested type T or fails gracefully, returning a Result<T>.

buildComplexGroundExpression(java.lang.String) - function in it.unibo.alchemist.model.sapere.dsl.impl.ExpressionFactory

Given a single literal (either variable or constant), builds the corresponding expression.

buildExpression(double) - function in it.unibo.alchemist.model.sapere.dsl.impl.ExpressionFactory

Given a number, builds a numeric expression.

buildExpression(java.lang.String) - function in it.unibo.alchemist.model.sapere.dsl.impl.ExpressionFactory

Given a single literal (either variable or constant), builds the corresponding expression.

buildExpression(org.danilopianini.lang.HashString) - function in it.unibo.alchemist.model.sapere.dsl.impl.ExpressionFactory

Given a single literal (either variable or constant), builds the corresponding expression.

buildField(java.util.function.Function,T) - function in org.protelis.vm.impl.AbstractExecutionContext

 

buildFieldDeferred(java.util.function.Function,T,java.util.function.Supplier) - function in org.protelis.vm.impl.AbstractExecutionContext

 

buildLiteralNode(org.danilopianini.lang.HashString) - function in it.unibo.alchemist.model.sapere.dsl.impl.ExpressionFactory

Given a single literal (either variable or constant), builds the corresponding ITreeNode.

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