alchemist-incarnation-biochemistry/it.unibo.alchemist.model.biochemistry/CircularCellProperty

CircularCellProperty

interface CircularCellProperty : CellProperty<Euclidean2DPosition> (source)

A node's capability to behave as a cell with a circular area.

Inheritors

CircularDeformableCellProperty

CircularDeformableCell

Properties

abstract val diameter: Double

The diameter of the cell.

abstract val junctions: ObservableMutableMap<Junction, ObservableMutableMap<Node<Double>, Int>>

The map junction - node - quantity.

open val junctionsCount: Int

The total number of junctions in this node.

abstract val node: Node<Double>

polarizationVersor

abstract var polarizationVersor: Euclidean2DPosition

The polarization versor, e.g. a versor indicating the direction in which the cell will move the next time.

open val radius: Double

The radius of the cell.

Functions

open fun addJunction(junction: Junction, neighbor: Node<Double>)

Add a junction to the current node. junction the junction. neighbor the neighbor node at the other side of the junction.

addPolarizationVersor

abstract fun addPolarizationVersor(versor: Euclidean2DPosition)

Add versor to the polarization versor inside the cell; useful for considering the combination of various stimuli in a cell.

abstract fun cloneOnNewNode(node: Node<Double>): Capability<Double>

containsJunction

open fun containsJunction(junction: Junction): Boolean

Return true if a junction is present in the current node, false otherwise. Note: a junction is considered present if the method junction.equals(j) return true.

getAllNodesLinkWithJunction

open fun getAllNodesLinkWithJunction(): Set<Node<Double>>

Returns set of Nodes which are linked by a junction with the current node.

getNeighborLinkWithJunction

open fun getNeighborLinkWithJunction(junction: Junction): Set<Node<Double>>

Returns a set of Nodes which are linked with the current node by a junction of the type junction.

observeContainsJunction

open fun observeContainsJunction(junction: Junction): Observable<Boolean>

Return an observable view of the presence of the junction in the current node.

observeNeighborLinkWithJunction

open fun observeNeighborLinkWithJunction(junction: Junction): Observable<Set<Node<Double>>>

Returns an observable view of the set of Nodes which are linked with the current node by a junction.

open fun removeJunction(junction: Junction, neighbor: Node<Double>)

Removes a junction from this node.