alchemist/it.unibo.alchemist.model.biochemistry.conditions/BiomolPresentInEnv

BiomolPresentInEnv

class BiomolPresentInEnv<P : Position<out P>>(environment: Environment<Double, P>, reaction: NodeReaction<Double>, biomolecule: Biomolecule, requiredQuantity: Double) : GenericMoleculePresent<Double>

A condition requiring requiredQuantity units of biomolecule in the surrounding environment.

Constructors

BiomolPresentInEnv

constructor(environment: Environment<Double, P>, reaction: NodeReaction<Double>, biomolecule: Biomolecule, requiredQuantity: Double)

Properties

isValid

override val isValid: Observable<Boolean>

The live validity of this condition.

quantity

open override val quantity: Observable<Double>

Observable quantity consumed by the owning biochemical reaction's mass-action law.

reaction

override val reaction: NodeReaction<Double>

The NodeReaction owning this condition, hosted by targetNode.

requiredQuantity

val requiredQuantity: Double

Required quantity configured for this condition.

targetNode

val targetNode: Node<Double>

Functions

beforeReactionFires

open fun beforeReactionFires()

Signals that the owning reaction is about to fire. Used to implement conditions latched to changes that occur in-between reaction executions.

cloneCondition

override fun cloneCondition(newReaction: Reaction<Double>): Condition<Double>

Creates an equivalent condition owned by newReaction, such as a reaction cloned onto a new node. A condition targeting the host of its reaction targets the host of newReaction, which must then be a Node; a condition targeting any other node keeps its target.

dispose

open override fun dispose()

Disposes and releases the resources held by this object.

getMolecule

fun getMolecule(): Molecule

Molecule whose quantity this condition observes.

shouldEqual

infix fun Condition<*>.shouldEqual(other: Condition<*>)

toString

open override fun toString(): String