alchemist/it.unibo.alchemist.model.biochemistry/CellProperty

CellProperty

interface CellProperty<P : Vector<P>> : Capability<Double>

A node's capability to behave as a cell.

Inheritors

Properties

Link copied to clipboard
abstract val junctions: ObservableMutableMap<Junction, ObservableMutableMap<Node<Double>, Int>>

The map junction - node - quantity.

Link copied to clipboard
open val junctionsCount: Int

The total number of junctions in this node.

Link copied to clipboard
abstract val node: Node<Double>

The node to which the capability is added.

Link copied to clipboard
abstract var polarizationVersor: P

The polarization versor, e.g. a versor indicating the direction in which the cell will move the next time.

Functions

Link copied to clipboard
open fun addJunction(junction: Junction, neighbor: Node<Double>)

Add a junction to the current node. junction the junction. neighbor the neighbor node at the other side of the junction.

Link copied to clipboard
abstract fun addPolarizationVersor(versor: P)

Add versor to the polarization versor inside the cell; useful for considering the combination of various stimuli in a cell.

Link copied to clipboard
abstract fun cloneOnNewNode(node: Node<Double>): Capability<Double>

Clones this property to be added on a new node.

Link copied to clipboard
open fun containsJunction(junction: Junction): Boolean

Return true if a junction is present in the current node, false otherwise. Note: a junction is considered present if the method junction.equals(j) return true.

Link copied to clipboard
open fun getAllNodesLinkWithJunction(): Set<Node<Double>>

Returns set of Nodes which are linked by a junction with the current node.

Link copied to clipboard
open fun getNeighborLinkWithJunction(junction: Junction): Set<Node<Double>>

Returns a set of Nodes which are linked with the current node by a junction of the type junction.

Link copied to clipboard
open fun observeContainsJunction(junction: Junction): Observable<Boolean>

Return an observable view of the presence of the junction in the current node.

Link copied to clipboard
open fun observeNeighborLinkWithJunction(junction: Junction): Observable<Set<Node<Double>>>

Returns an observable view of the set of Nodes which are linked with the current node by a junction.

Link copied to clipboard
open fun removeJunction(junction: Junction, neighbor: Node<Double>)

Removes a junction from this node.

Link copied to clipboard
infix fun Capability<*>.shouldEqual(other: Capability<*>)
Generated by Dokka
(c) Danilo Pianini and contributors listed in the Alchemist build files